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Table 1 Mean methylation fractions for BDNF CpG units in bipolar disorder versus controls

From: Quantitative leukocyte BDNF promoter methylation analysis in bipolar disorder

Amplicon

CpG unit

BP MMF (SD)

Controls MMF (SD)

Z

Asymp. sig.

Cohen's d

D2a

1, 2

0.354 (0.077)

0.335 (0.067)

−1.712

0.087

 

11, 26

0.156 (0.025)

0.159 (0.038)

−0.061

0.951

 

12, 13, 14

0.301 (0.030)

0.289 (0.034)

−1.864

0.062

 

15

0.103 (0.022)

0.100 (0.026)

−0.682

0.495

 

16

0.086 (0.012)

0.082 (0.015)

1.797

0.072

 

17

0.122 (0.032)

0.116 (0.015)

−2.33

0.02*

 

18, 19, 20

0.242 (0.032)

0.232 (0.035)

−1.789

0.072

 

21

0.128 (0.014)

0.126 (0.023)

−0.449

0.654

 

22, 23

0.275 (0.018)

0.260 (0.023)

−2.094

0.036*

 

24

0.089 (0.011)

0.086 (0.028)

−1.217

0.224

 

27, 28, 29, 30

0.246 (0.031)

0.238 (0.014)

−1.284

0.199

 

3

0.355 (0.034)

0.333 (0.032)

−3.315

0.001 **

0.680

4

0.054 (0.025)

0.048 (0.031)

−1.054

0.292

 

5, 6

0.279 (0.047)

0.274 (0.022)

−0.733

0.464

 

9, 10

0.254 (0.034)

0.255 (0.038)

−0.256

0.798

 

D3

11, 12, 13

0.227 (0.014)

0.217 (0.019)

−2.889

0.004 **

0.610

14

0.085 (0.011)

0.079 (0.017)

−2.37

0.018*

 

15, 16, 17

0.181 (0.016)

0.163 (0.027)

−2.993

0.003 **

0.840

18

0.068 (0.012)

0.061 (0.011)

−3.179

0.001 **

0.610

19

0.055 (0.011)

0.056 (0.012)

−0.157

0.875

 

2, 3, 4

0.284 (0.019)

0.282 (0.020)

−0.484

0.628

 

20

0.480 (0.068)

0.504 (0.101)

−0.728

0.466

 

21

0.021 (0.008)

0.021 (0.015)

−0.728

0.466

 

22, 23, 8

0.136 (0.008)

0.126 (0.014)

−3.8

<0.001 **

0.910

5, 6

0.316 (0.029)

0.302 (0.054)

−0.601

0.548

 

7

0.068 (0.011)

0.066 ()0.016

−0.799

0.424

 

9, 10

0.069 (0.009)

0.066 (0.012)

−2.017

0.044*

 

D5

11, 12, 13

0.233 (0.030)

0.220

−1.962

0.05*

 

14

0.065 (0.014)

0.063

−0.853

0.394

 

15

0.253 (0.085)

0.253

−0.155

0.877

 

16

0.093 (0.022)

0.083

−2.119

0.034*

 

17, 18, 19

0.172 (0.017)

0.160

−2.447

0.014*

 

4, 5

0.168 (0.097)

0.200

−1.09

0.276

 

6

0.056 (0.017)

0.057

−0.391

0.696

 

7, 8

0.205 (0.021)

0.197

1.671

0.095

 

9

0.061 (0.048)

0.074

−1.35

0.177

 
  1. *Significant at alpha = 0.05; ** significant after FDR, alpha = 0.004; BP, bipolar disorder. MMF, mean methylation; d, effect size; Z, Mann Whitney U test statistic.