Table 1 List of the top 20 common target genes shared by of BD GWAS dataset 1 and dataset 2
Gene | SNP-associated regulatory elements | BD GWAS dataset 1 | BD GWAS dataset 2 | ||
|---|---|---|---|---|---|
SNP | Pdataset1 | SNP | Pdataset2 | ||
IPCEF1 | TADs | rs9371601 | 1.80 × 10−6 | rs9371601 | 4.33 × 10−9 |
OPRM1 | TADs | rs9371601 | 1.80 × 10−6 | rs9371601 | 4.33 × 10−9 |
SYNE1 | TADs | rs9371601 | 1.80 × 10−6 | rs9371601 | 4.33 × 10−9 |
RGS17 | TADs | rs215005 | 6.04 × 10−6 | rs214952 | 3.19 × 10−8 |
TFB1M | TADs | rs215005 | 6.04 × 10−6 | rs214952 | 3.19 × 10−8 |
CCDC170 | TADs | rs9371601 | 1.80 × 10−6 | rs551900 | 3.35 × 10−8 |
ENSG00000235652 | TADs | rs548985 | 6.58 × 10−6 | rs551900 | 3.35 × 10−8 |
HDAC2 | TADs | rs548985 | 6.58 × 10−6 | rs551900 | 3.35 × 10−8 |
KMT2D | CIRs | rs10783301 | 3.32 × 10−6 | rs10875914 | 8.27 × 10−8 |
ENSG00000258101 | CIRs, TFBRs | rs10459221 | 4.20 × 10−7 | rs10459232 | 8.81 × 10−8 |
RHEBL1 | CIRs, TFBRs | rs7969091 | 3.25 × 10−7 | rs7969091 | 8.91 × 10−8 |
ENSG00000257346 | CIRs, lncRNAs | rs11168839 | 2.89 × 10−6 | rs11168839 | 1.24 × 10−7 |
PRKAG1 | CIRs, TFBRs | rs2304275 | 1.45 × 10−6 | rs10875915 | 1.82 × 10−7 |
ENSG00000257913 | CIRs, TFBRs | rs2293445 | 6.51 × 10−6 | rs2293445 | 1.96 × 10−7 |
VPRBP | TADs, CIRs, TFBRs | rs2302417 | 4.93 × 10−9 | rs736408 | 2.00 × 10−7 |
ITIH3 | TADs, CIRs, TFBRs | rs4481150 | 1.09 × 10−8 | rs736408 | 2.00 × 10−7 |
ENSG00000272822 | CIRs, TFBRs | rs1054442 | 3.27 × 10−6 | rs10783299 | 2.53 × 10−7 |
RNU6-940P | CIRs, TFBRs | rs1054442 | 3.27 × 10−6 | rs10783299 | 2.53 × 10−7 |
WNT1 | CIRs, TFBRs | rs1054442 | 3.27 × 10−6 | rs10783299 | 2.53 × 10−7 |
LMAN2L | TFBRs | rs72809838 | 6.47 × 10−9 | rs2271893 | 4.59 × 10−7 |